© Naïma Minet, ISA | Acidification of the rhizosphere by Arabidopsis roots. In vitro culture of 10-day-old Arabidopsis seedlings. Yellow areas indicate an acidic pH below 5.2, while purple areas indicate a pH above 6.8.
Exploratory project PHARE (2024 - 2025)

PHARE - The role of rhizodeposits in communication between plants and their rhizospheric biotic environment

Soil, plants, and pathogenic or beneficial microorganisms form dynamic associations in permanent interactions, influencing each other, with multiple consequences on access to nutrients and life cycles. Rhizodeposits directly influence both rhizospheric microbial composition and plant development, which are important determinants of plant susceptibility to biotic and abiotic stresses.

Background and challenges

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Despite their significance, the function, nature and mode of action of rhizodeposits remain poorly understood. It is now essential to unravel the principle and the complexity underlying this communication in the soil and establish a functional link between the nature of rhizodeposits and the regulation of rhizospheric biotic interactions. To achieve this goal, it is essential to develop interdisciplinary approaches that encompass physiology, pathology, microbiology, ecology, chemistry, and soil science, considering soil interactions in their entirety.
The PHARE project is based on two previous initiatives of 2021 and 2022: the PHARE project supported by the SuMCrop metaprogramme (A. Attard and J.-B. Peltier) and the DREAM project supported by the AgroEcoSystem department (F. Rees).

Objectives

The main mission of PHARE is to lead an interdisciplinary community (physiology, pathology, chemical ecology, microbiology, physics, ecophysiology, modelling, etc.) whose research focuses on the role of rhizodeposits in the communication and interaction of roots with their rhizospheric biotic environment. PHARE provides a platform for the exchange of scientific and technological expertise with the aim of promoting interdisciplinary approaches to overcome obstacles and develop new concepts on the physiology, pathology and microbiology of rhizosphere communication and adaptation to environments. PHARE targets researchers, engineers and technicians working on rhizospheric communication, rhizodeposition processes and/or soil-borne diseases, and aims to build a complementary scientific community within INRAE departments (SPE, BAP, AgroEcoSystem and ECODIV), other research institutes and French universities. 
PHARE plans to organize a scientific workshop (12 to 14 November 2024). This will be synthesized by the scientific steering committee (SC) to define the emerging themes and draw up the program for the 2025 webinar. We will also organize two meetings, first for reflection (in 2024) and then for writing (in 2025), in order to finalize a review article, which will propose a practical and critical guide to the standardization of methods for collecting and analyzing rhizodeposits, which is necessary for functional analyses.

Involved research units and partnership:

Research unitScientific divisionField of expertise
ISASPEPhytopathology
Plants-oomycetes interactions
Spread of telluric diseases
Behavior of micro-organisms
BPMPBAPBiochemistry of plant-microbiota interactions
ECOSYSAgroEcoSystemSoil biogeochemistry
Plant ecophysiology
Modelling plant-soil interactions
IGEPPSPEPhytopathology
Plants-nematodes interactions
Nematode genetic diversity
IGEPPSPEAnalytical chemistry
Metabolomics
IJPBBAPPlant physiology
Molecular biology, biochemistry, genetics
Allelopathic signalling
Root exudates
EGFVUniversité de BordeauxPlant physiology
Molecular biology, biotechnologies, omics
Exudation, signalization
Plant-microbiome-soil interaction 

Contact of the coordinator(s): 

Mailing list : phare@groupes.renater.fr
To be added to the PHARE mailing list, contact  Agnès Attard.

Modification date: 11 September 2024 | Publication date: 17 May 2024 | By: Agnès ATTARD / Jean-Benoît PELTIER / Frédéric REES